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Table 1 Categories, criteria, and coding used for museum trees

From: Communicating Phylogeny: Evolutionary Tree Diagrams in Museums

Category

Description and coding

Topological and diagrammatic elements

   Orientation

Overall orientation of tree, or the position of the root relative to branches. Those with no overall orientation (e.g., circular or radial geometries) were coded as N/A

   Direction

Overall direction of branches from the root; circular trees were coded by the direction of the initial spiral, and radial trees were coded N/A

   Geometry

Trees classified as a cladogram and “almost-a-cladogram” were coded as angled, rectangular, curvogram/swoopogram, circular, radial, or eurogram. Non-cladistic/other evolutionary trees, were coded as N/A

   Terminal branch end points

Whether branches end at different levels

   Images of taxa

Taxa are represented visually (graphically through images, silhouettes, or with models/specimens)

   “Tree of life”

Diagrams has a central main trunk with taxa branching off of it with a clear linear progression from “lower” to “higher” forms (Haeckel 1874)

Tree content

   Anagenesis

Depicts ancestor–descendant relationships between named taxa (e.g., genus or species) with one or more named taxa in a sequence along a branch

   Taxa

Invertebrates, vertebrates, broad taxonomic categories, or other (e.g., viruses)

   Extinct taxa

Includes extinct taxa

   Humans and their most recent extinct relatives

Includes one or more members of this group

   Geological time

Includes an indication of time

   Classification

Explicit links between parts of tree and more familiar classifications of organisms

   Common ancestor

Refers to one or more common ancestors

   Synapomorphies

Synapomorphies (shared characteristics) are indicated

   Hybridization

Includes lateral transfers of genetic material, i.e., it represents a phylogenetic network in which hybridization or similar events are believed to have been involved, rather than a tree that only depicts branching sequence

Presentation and explanation

   Exhibit component

Static flat graphic panel, graphic backdrop for specimens/models, 3D representation, media component (e.g., video or game in kiosk/online), or a supplemental document

   Instructional information/interpretation

Provides an explanation of what the tree shows (e.g., refers to relationships between taxa, describes changes or trends over time), instructs how to interpret evolutionary diagrams (e.g., describes trees as branching diagrams that show relatedness)

 Nature of science

Labels or legends include information about the data used to build the tree, refers trees as hypotheses or product of scientific reasoning